Posted in agenda, progress on May 30, 2007 | Leave a Comment »
WASSERMAN/OUELLETTE LABORATORY
SUMMARY FORM
Name: Warren Cheung
Date: 2007-05-30
Progress
Draft of Proposal
Modularity
Setup for Entrez Gene to PubMed “muscle” subset
Other Activities
Reading
statistics – multiple testing correction, Fisher/hypergeometric distribution.
GO term analysis
MSL Poster
Goals
Complete [...]
Posted in agenda on May 16, 2007 | Leave a Comment »
Qualifying Exam — Thursday August 9th @ 1430-1700, at UBiC
Proposal — webpage location
Format for editing
(core?) Analysis section
Second Disease Area
Heart vs. Diabetes
vs. Cancer?
Progress: Second (and onward) degree links
via other terms (Chemical Compounds, etc.) and pathways/interactions/regulation
statistics
Posted in agenda on May 2, 2007 | Leave a Comment »
Agenda
Introductions, discuss CV
Quick overview/proposal presentation
Prototype/Preliminary results
Questions, comments, suggestions
Notes on the discussion with the committee
examine Whole Genome association studies (e.g. Parkinson’s, but also InterHeart, Diabetes) to validate genes found (in implicated loci)
For flexibility, should expand scope to include other major disease (diabetes, liver)
“haplotype”-style analysis – co-citation rate of genes
investigate textpresso-SGD link, use of UBC library literature resources
mining Patent literature – especially not well studied
investiagte rating of evidence – validation to provide quantitative measure of effectiveness of various evidence types
investigate [...]
