Was a little leery about the results I’m getting from the related_articles query. Believe I now have the answer. I need to reverse the related_articles hookup, with related_articles.pmid hooking to the mesh and the related_pmid hooking to the generif.pmid. This is because related_articles is a subset of the real related articles, and so our limitied [...]
Archive for October, 2007
Fixing Searching Related Articles
Posted in Uncategorized on October 26, 2007 | Leave a Comment »
Focus: MeSH to OMIM Disease Mapping
Posted in UMLS, todo on October 5, 2007 | Leave a Comment »
Important thing TODO, from today’s meeting: Create a validation set – Extract OMIM disease-gene links. Map OMIM genes to Entrez Gene. Map OMIM diseases to MeSH terms.
Of these, the OMIM-MeSH is likely the hard part. I should do this by UMLS, but UMLS is the ugliest database I’ve ever seen. Must no longer be afraid…
